Squeezing the DNA Sequences with Pattern Recognition Techniques in Multi-Processing Environment

نویسنده

  • Panneer Arokiaraj
چکیده

This paper improves an existing work of compressing DNA sequences. Previously the compression was achieved with two processors; in this paper, 4-core and 8-core capacity is used and this was done using ParPro simulator. The improvement of compression of Genome sequences which are sourced from standard DNA databanks are tabulated and compared with existing compressors. Basic technique of compression exploits concepts drawn from Pattern Recognition techniques. Usage of parallelism improved compression ratio and time appreciably. Keywords—Compression Ratio, DNA Sequence Compression, ParPro, PPRDNAC, Time Complexity.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Limestone chemical components estimation using image processing and pattern recognition techniques

In this study based on image analysis, an ore grade estimation model was developed. The study was performed at a limestone mine in central Iran. The samples were collected from different parts of the mine and crushed in size from 2.58 cm down to 15 cm. The images of the samples were taken in appropriate environment and processed. A total of 76 features were extracted from the identified rock sa...

متن کامل

An Evolutionary and Phylogenetic Study of the BMP15 Gene

DNA sequence data contains a wealth of biologically useful information. Recent innovations in DNA sequencing technology have greatly increased our capacity to determine massive amounts of nucleotide sequences. These sequences can be used to specify the characteristics of different regions, interpret the evolutionary relationships between categorized groups, likelihood of performing multiple com...

متن کامل

A Multi Linear Discriminant Analysis Method Using a Subtraction Criteria

Linear dimension reduction has been used in different application such as image processing and pattern recognition. All these data folds the original data to vectors and project them to an small dimensions. But in some applications such we may face with data that are not vectors such as image data. Folding the multidimensional data to vectors causes curse of dimensionality and mixed the differe...

متن کامل

الگوریتمی جدید در تشخیص قالب و مرکزیابی دقیق ستارگان تصاویر آسمان شب

In this paper a novel night sky star pattern recognition and precise centroiding approaches are proposed. Precision and computation time of image processing algorithm paly a great role in spacecraft in which the night sky star images are utilized for attitude determination. Star pattern recognition and centroiding are the most important steps of image processing algorithm in such attitude deter...

متن کامل

Fire detection using video sequences in urban out-door environment

Nowadays automated early warning systems are essential in human life. One of these systems is fire detection which plays an important role in surveillance and security systems because the fire can spread quickly and cause great damage to an area. Traditional fire detection methods usually are based on smoke and temperature detectors (sensors). These methods cannot work properly in large space a...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2014